Faculty Information - Abe Yuichi

Abe Yuichi

Department / Course FACULTY OF BIOTECHNOOLOGY AND LIFE SCIENCE Department of Biotechnology and Life Sciences

Job

Book and thesis
1.	2004/12	Papers	Crystallization of parasporin-2, a Bacillus thuringiensis crystal protein with selective cytocidal activity against human cells. Acta crystallographica. Section D, Biological crystallography 60 (Pt 12 Pt 2),pp.2355-2357 (Co-authored)
2.	2006/09	Papers	Cytocidal actions of parasporin-2, an anti-tumor crystal toxin from Bacillus thuringiensis The Journal of biological chemistry 281 (36),pp.26350-26360 (Co-authored)
3.	2008/02	Papers	Raft-targeting and oligomerization of Parasporin-2, a Bacillus thuringiensis crystal protein with anti-tumour activity Journal of biochemistry 143 (2),pp.269-275 (Co-authored)
4.	2009/02	Papers	Crystal structure of the parasporin-2 Bacillus thuringiensis toxin that recognizes cancer cells Journal of molecular biology 386 (1),pp.121-133 (Co-authored)
5.	2009/10	Papers	Parasporin-2 requires GPI-anchored proteins for the efficient cytocidal action to human hepatoma cells Toxicology 264 (1-2),pp.80-88 (Co-authored)
6.	2012/02	Papers	Docosahexaenoic acid mediates peroxisomal elongation, a prerequisite for peroxisome division Journal of cell science 125 (Pt 3),pp.589-602 (Co-authored)
7.	2014/04	Papers	Very-long-chain polyunsaturated fatty acids accumulate in phosphatidylcholine of fibroblasts from patients with Zellweger syndrome and acyl-CoA oxidase1 deficiency Biochimica et biophysica acta 1841 (4),pp.610-619 (Co-authored)
8.	2014/07	Papers	Mild reduction of plasmalogens causes rhizomelic chondrodysplasia punctata: functional characterization of a novel mutation Journal of human genetics 59 (7),pp.387-392 (Co-authored)
9.	2015/11	Papers	Dysregulation of Plasmalogen Homeostasis Impairs Cholesterol Biosynthesis The Journal of biological chemistry 290 (48),pp.28822-28833 (Co-authored)
10.	2017/01	Papers	Deficiency of a Retinal Dystrophy Protein, Acyl-CoA Binding Domain-containing 5 (ACBD5), Impairs Peroxisomal β-Oxidation of Very-long-chain Fatty Acids The Journal of biological chemistry 292 (2),pp.691-705 (Co-authored)
11.	2017/01	Papers	Glycan region of GPI anchored-protein is required for cytocidal oligomerization of an anticancer parasporin-2, Cry46Aa1 protein, from Bacillus thuringiensis strain A1547 Journal of invertebrate pathology 142,pp.71-81 (Co-authored)
12.	2017/03	Papers	Defining the dynamin-based ring organizing center on the peroxisome-dividing machinery isolated from Cyanidioschyzon merolae Journal of cell science 130 (5),pp.853-867 (Co-authored)
13.	2017/03	Papers	Plasmalogen biosynthesis is spatiotemporally regulated by sensing plasmalogens in the inner leaflet of plasma membranes Scientific reports 7,pp.43936 (Co-authored)
14.	2017/04	Papers	Reduction of Ether-Type Glycerophospholipids, Plasmalogens, by NF-κB Signal Leading to Microglial Activation The Journal of neuroscience 37 (15),pp.4074-4092 (Co-authored)
15.	2018/11	Papers	Onsite GTP fuelling via DYNAMO1 drives division of mitochondria and peroxisomes Nature communications 9 (1),pp.4634 (Co-authored)
16.	2018/12	Papers	Peroxisome biogenesis deficiency attenuates the BDNF-TrkB pathway-mediated development of the cerebellum Life science alliance 1 (6),pp.e201800062 (Co-authored)
17.	2019/02	Papers	A newly identified mutation in the PEX26 gene is associated with a milder form of Zellweger spectrum disorder Cold Spring Harbor molecular case studies 5 (1),pp.a003483 (Co-authored)
18.	2019/02	Papers	Dynamics of the nucleoside diphosphate kinase protein DYNAMO2 correlates with the changes in the global GTP level during the cell cycle of Cyanidioschyzon merolae Proceedings of the Japan Academy. Series B, Physical and biological sciences 95 (2),pp.75-85 (Co-authored)
19.	2019/05	Papers	Impaired plasmalogen synthesis dysregulates liver X receptor-dependent transcription in cerebellum Journal of biochemistry 166 (4),pp.353-361 (Co-authored)
20.	2019/11	Papers	Plasmalogen mediates integration of adherens junction Journal of biochemistry 166 (5),pp.423-432 (Co-authored)
21.	2020/04	Papers	A peroxisome deficiency-induced reductive cytosol state up-regulates the brain-derived neurotrophic factor pathway The Journal of biological chemistry 295 (16),pp.5321-5334 (Co-authored)
22.	2020/05	Papers	Recent insights into peroxisome biogenesis and associated diseases Journal of cell science 133 (9),pp.jcs236943 (Co-authored)
23.	2020/10	Papers	Mammalian Homologue NME3 of DYNAMO1 Regulates Peroxisome Division International Journal of Molecular Sciences 21 (21),pp.8040 (Co-authored)
24.	2020/10	Papers	Peroxisome Deficiency Impairs BDNF Signaling and Memory Frontiers in cell and developmental biology 8,pp.567017 (Co-authored)
25.	2021/04	Papers	Identification of a Homozygous PEX26 Mutation in a Heimler Syndrome Patient Genes 12 (5),pp.646 (Co-authored)
26.	2022/04	Papers	De novo formation and maintenance of mammalian peroxisomes in cultured PEX16-knockout cells generated by CRISPR/Cas9 Journal of Cell Science 135 (9),pp.jcs258377 (Co-authored)
27.	2022/11	Papers	Molecular insights into peroxisome homeostasis and peroxisome biogenesis disorders Biochimica et Biophysica Acta - Molecular Cell Research 1869 (11),pp.119330 (Co-authored)
28.	2023/01	Papers	Alterations in ether lipid metabolism and the consequences for the mouse lipidome. Biochimica et biophysica acta. Molecular and cell biology of lipids 1868 (4),pp.159285 (Co-authored)
29.	2023/03	Papers	Genetic defects in peroxisome morphogenesis (Pex11β, dynamin-like protein 1, and nucleoside diphosphate kinase 3) affect docosahexaenoic acid-phospholipid metabolism. Journal of inherited metabolic disease 46 (2),pp.273-285 (Co-authored)